BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C02LP1|AL426330
(777 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1534 0.0
>3x_Contig1794
Length = 36744
Score = 1534 bits (774), Expect = 0.0
Identities = 776/777 (99%)
Strand = Plus / Plus
Query: 1 gatccgctccaggcgccactggtcaaaaataagtgctcttaacgttagaaacgtacgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18932 gatccgctccaggcgccactggtcaaaaataagtgctcttaacgttagaaacgtacgaat 18991
Query: 61 cgtgatatatatatatatacgtatgtatacgggatctgtgtatagatcaacatatgcgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18992 cgtgatatatatatatatacgtatgtatacgggatctgtgtatagatcaacatatgcgta 19051
Query: 121 acatttatatacacaccgacacgaaaagactctaattagaaaaggaacacacgcatattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19052 acatttatatacacaccgacacgaaaagactctaattagaaaaggaacacacgcatattg 19111
Query: 181 atacaaatcaaactaggaacaaatcagtctgtttattaggcaattgggttcctggttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19112 atacaaatcaaactaggaacaaatcagtctgtttattaggcaattgggttcctggttaga 19171
Query: 241 tatgagagactaagggcagcgaaaatgattggtttttgataatgtggtatcctaccaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19172 tatgagagactaagggcagcgaaaatgattggtttttgataatgtggtatcctaccaagt 19231
Query: 301 tcttgagataacgttgatctccccaagtatttgagtagctcccagttaatatctaaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19232 tcttgagataacgttgatctccccaagtatttgagtagctcccagttaatatctaaatgt 19291
Query: 361 tgtgggtcgctcagcaaagtgaatgacaacatgatgatgatcgatttatgtaatggcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19292 tgtgggtcgctcagcaaagtgaatgacaacatgatgatgatcgatttatgtaatggcttt 19351
Query: 421 agacatttggaatgttgaccgttgaagattaacatcaccacctgtctccagagcgtccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19352 agacatttggaatgttgaccgttgaagattaacatcaccacctgtctccagagcgtccat 19411
Query: 481 tttacacatttgataaaattgtcactgaagaaataaccatacactcgttctttgaccgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19412 tttacacatttgataaaattgtcactgaagaaataaccatacactcgttctttgaccgac 19471
Query: 541 ccgcttgatttcttatcggataactcatttaactcttctaacctttgcatgagtntcctt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19472 ccgcttgatttcttatcggataactcatttaactcttctaacctttgcatgagtatcctt 19531
Query: 601 gtcattgaaccatgttgtgtctgagattcctttgcctctgaatcgaacgtcattgaggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19532 gtcattgaaccatgttgtgtctgagattcctttgcctctgaatcgaacgtcattgaggaa 19591
Query: 661 gtattcactttattcttcttaagcttctctttcaaaaggatggatttcacattcttataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19592 gtattcactttattcttcttaagcttctctttcaaaaggatggatttcacattcttataa 19651
Query: 721 gtcttgacgacattccatgcgacaaataacaaaaggaagtccttccaaggttttcta 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19652 gtcttgacgacattccatgcgacaaataacaaaaggaagtccttccaaggttttcta 19708
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9523
Number of Sequences: 1807
Number of extensions: 9523
Number of successful extensions: 1029
Number of sequences better than 1.0e-20: 1
length of query: 777
length of database: 10,358,551
effective HSP length: 16
effective length of query: 761
effective length of database: 10,329,639
effective search space: 7860855279
effective search space used: 7860855279
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)